BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025D02LP1|AL428365
(887 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig903 1575 0.0
>3x_Contig903
Length = 4000
Score = 1575 bits (794), Expect = 0.0
Identities = 842/856 (98%), Gaps = 2/856 (0%)
Strand = Plus / Minus
Query: 33 gggaaaaaagacaatcgatgcgaatcagtacgggaatgaaagtgatatcgataaagacaa 92
|||||||||||||| ||| ||||| ||| ||||||| |||||||||| | ||||||||||
Sbjct: 3687 gggaaaaaagacaagcgaggcgaagcaggacgggaaggaaagtgatagctataaagacaa 3628
Query: 93 acgagggaacagaagagcagttattgcctaagagacaaccacaattaatattatttcggt 152
|| ||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3627 actagggaacagaagatcatttagtgcctaagagacaaccacaattaatattatttcggt 3568
Query: 153 ggtttctcgaagatttagtsagcggccagctcgagctggctgctgagccagtttgcacta 212
||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 3567 ggtttctcgaagatttagtcagcggc-agctcgagctggctgctgagccagtttgcacta 3509
Query: 213 ggttgcagttggctaatgtctttcctggggaaagggcatgtgcaagcgcctccaatgaga 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3508 ggttgcagttggctaatgtctttcctggggaaagggcatgtgcaagcgcctccaatgaga 3449
Query: 273 taaggacaccggtttataatgttacccggacttgatttataattcattttgtcagaattg 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3448 taaggacaccggtttataatgttacccggacttgatttataattcattttgtcagaattg 3389
Query: 333 ggaagattctggaactctttcgccctttaaggtgctactgtcttgatctgagatgtccga 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3388 ggaagattctggaactctttcgccctttaaggtgctactgtcttgatctgagatgtccga 3329
Query: 393 ataaagaaagaccgttgcaatattgagagaaggtcgtgaagaaacttttcagtagtggta 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3328 ataaagaaagaccgttgcaatattgagagaaggtcgtgaagaaacttttcagtagtggta 3269
Query: 453 gtttagaggttttgggtgttgagagtttgtttttactaacgtatcggtatggtctcgcct 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3268 gtttagaggttttgggtgttgagagtttgtttttactaacgtatcggtatggtctcgcct 3209
Query: 513 ttctcactggtgttactaattttttacattgtatatggggccagacacaatacatagata 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3208 ttctcactggtgttactaattttttacattgtatatggggccagacacaatacatagata 3149
Query: 573 catagtgtatagatttggattgaattttagatttagaatcgtttttaagctcctagattc 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3148 catagtgtatagatttggattgaattttagatttagaatcgtttttaagctcctagattc 3089
Query: 633 tagaattggggcactaggcaagttgaacgtgttcctcttcctgggattgctcgatcaacc 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3088 tagaattggggcactaggcaagttgaacgtgttcctcttcctgggattgctcgatcaacc 3029
Query: 693 gttcctcgataatctcttcgaattgtctctcacagtttggtacaaatagtaaaacgaaca 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3028 gttcctcgataatctcttcgaattgtctctcacagtttggtacaaatagtaaaacgaaca 2969
Query: 753 ataggcagttcttcagtataccaaggatgatgttgtccgttcttgggtttggcacaacgt 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2968 ataggcagttcttcagtataccaaggatgatgttgtccgttcttgggtttggcacaacgt 2909
Query: 813 atctcataagcgtgttgtctgtaaagaaattccagggtctgtaaacgtccaat-aatagg 871
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2908 atctcataagcgtgttgtctgtaaagaaattccagggtctgtaaacgtccaataaatagg 2849
Query: 872 ttaaagtacagtctgt 887
||||||||||||||||
Sbjct: 2848 ttaaagtacagtctgt 2833
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7548
Number of Sequences: 1807
Number of extensions: 7548
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 887
length of database: 10,358,551
effective HSP length: 16
effective length of query: 871
effective length of database: 10,329,639
effective search space: 8997115569
effective search space used: 8997115569
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)